The French soldiers from a peacekeeping mission in nearby Ivory Coast will repair a bridge north of the capital which has been destroyed, shutting down country's main highway, an official in the prime minister's office said.
The floods were caused by unexpected heavy rains in Togo's south, which have swollen the Hao and Zio rivers north of Lome.
On top of the roads, several sections of railway have been cut off.
Donors have held crisis meetings with the government and Togo's development minister said a way must be found to help the "thousands of people who are stuck in their homes".
Assistance from France comes after Togo's army began helping deliver food and non-food items to those in need.
Neighbouring Ghana has also offered military assistance.
Until the French engineers can help re-open the main artery to the north, transporters serving Sahel countries such as Burkina Faso, Niger and Mali will have to make a 100 km detour.
Escalating global food and fuel costs are hitting Africa's poor particularly hard as these goods make up a greater proportion of incomes than in other parts of the world.
A Reuters witness in Lome said the impact of the floods could already be seen in the markets, where the price of a cup of maize had nearly doubled, rising to 1,400 CFA francs ($3.33) from 850 CFA francs just three days earlier.
Source: Reuters
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